A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
BMP1 location ⇒ 14:6436828-6437042   CU468634,CH242-272G24,14:6407691-6485927
(Clone quality: bE272G24 on chr=14; Num_of_Contigs=7; )
BMP1 location ⇒ 14:6438890-6439139   CU468634,CH242-272G24,14:6407691-6485927
(Clone quality: bE272G24 on chr=14; Num_of_Contigs=7; )
BMP1 location ⇒ 14:6441334-6441388   CU468634,CH242-272G24,14:6407691-6485927
(Clone quality: bE272G24 on chr=14; Num_of_Contigs=7; )
BMP10   ENSSSCG00000008345 3:67695255-67700924   FP236183,CH242-146A7,3:67562689-67713568
(Clone quality: bE146A7 on chr=3; Num_of_Contigs=2; )
BMP15   ENSSSCG00000012310 X:43964260-43970430   CU487217,CH242-238L3,X:43951093-44003836
(Clone quality: bE238L3 on chr=X; Num_of_Contigs=3; )
BMP2 ENSSSCG00000007055 17:15306119-15316425   CU606861,CH242-399P21,17:15306041-15324589
(Clone quality: bE399P21 on chr=17; Num_of_Contigs=2; )
BMP2 location ⇒ 17:15079530-15080387   CU457416,CH242-512I13,17:15078199-15081959
(Clone quality: bE512I13 on chr=17; Num_of_Contigs=7; )
BMP2 location ⇒ 17:15079601-15079773   CU457416,CH242-512I13,17:15078199-15081959
(Clone quality: bE512I13 on chr=17; Num_of_Contigs=7; )
BMP2 location ⇒ 17:15315579-15316436   CU606861,CH242-399P21,17:15306041-15324589
(Clone quality: bE399P21 on chr=17; Num_of_Contigs=2; )
BMP2 location ⇒ 17:15315650-15315822   CU606861,CH242-399P21,17:15306041-15324589
(Clone quality: bE399P21 on chr=17; Num_of_Contigs=2; )
BMP2K location ⇒ 8:119647376-119647267   CU984595,CH242-338C23,8:119633154-119650610
(Clone quality: bE338C23 on chr=8; Num_of_Contigs=2; )
BMP3 ENSSSCG00000009251 8:117920344-117928373    
BMP3 location ⇒ 8:117920940-117920765   FP016132,CH242-83M8,8:117917961-117921651
(Clone quality: bE83M8 on chr=8; Num_of_Contigs=7; )
BMP3 location ⇒ 8:117927850-117927447   FP016132,CH242-83M8,8:117921752-117936492
(Clone quality: bE83M8 on chr=8; Num_of_Contigs=7; )
BMP4 location ⇒ 1:191960051-191959953   CU914537,CH242-195D20,1:191954090-191963039
(Clone quality: bE195D20 on chr=1; Num_of_Contigs=14; )
BMP4 location ⇒ 1:191961378-191960999   CU914537,CH242-195D20,1:191954090-191963039
(Clone quality: bE195D20 on chr=1; Num_of_Contigs=14; )
BMP4 location ⇒ 1:191962505-191962406   CU914537,CH242-195D20,1:191954090-191963039
(Clone quality: bE195D20 on chr=1; Num_of_Contigs=14; )
BMP4 location ⇒ 1:191972564-191972943   CU914465,CH242-499G10,1:191971296-191974456
(Clone quality: bE499G10 on chr=1; Num_of_Contigs=19; )
BMP5 ENSSSCG00000001478 7:29721149-29844146    
BMP5 location ⇒ 7:102364-102275   CU657920,CH242-367F14,7:95842-128080
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
BMP5 location ⇒ 7:51028-50963   CU657920,CH242-367F14,7:36511-75259
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
BMP5 location ⇒ 7:63479-63382   CU657920,CH242-367F14,7:36511-75259
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
BMP5 location ⇒ 7:71921-71821   CU657920,CH242-367F14,7:36511-75259
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
BMP6 ENSSSCG00000001031 7:5477883-5501796    
BMP7 ENSSSCG00000007501 17:60121770-60211362    
BMP7 location ⇒ 17:60133910-60133712 CR974467,CH242-235B3,17:60049294-60206268
(Clone quality: bE235B3 on chr=17; Num_of_Contigs=2; ) 		 
BMP7 location ⇒ 17:60150788-60150635 CR974467,CH242-235B3,17:60049294-60206268
(Clone quality: bE235B3 on chr=17; Num_of_Contigs=2; ) 		 
BMP7 location ⇒ 17:60177488-60177294 CR974467,CH242-235B3,17:60049294-60206268
(Clone quality: bE235B3 on chr=17; Num_of_Contigs=2; ) 		 
BMP7 location ⇒ 17:60211329-60210945 CR956362,CH242-98D1,17:60206269-60416771
(No clone quality info on bE98D1) 		 
BMP8B location ⇒ 6:65204347-65204423   FP102827,CH242-261E13,6:65203797-65212631
(Clone quality: bE261E13 on chr=6; Num_of_Contigs=5; )
BMP8B location ⇒ 6:65386007-65386083 CR956622,PigE-219N9,6:65300804-65474973
(No clone quality info on bT219N9) 		 
BMP8B location ⇒ 6:65644716-65644653 CR956427,CH242-51O7,6:65474974-65651225
(No clone quality info on bE51O7) 		 
BMP8B location ⇒ 6:65645600-65645562 CR956427,CH242-51O7,6:65474974-65651225
(No clone quality info on bE51O7) 		 
BMPER   ENSSSCG00000016665 18:38578762-38822315    
BMPR1A ENSSSCG00000010360 14:91619867-91780826    
BMPR1A location ⇒ 14:91635145-91635239   CU041359,CH242-97P15,14:91625229-91635782
(Clone quality: bE97P15 on chr=14; Num_of_Contigs=11; )
BMPR1A location ⇒ 14:91768382-91768528   CU633355,CH242-179A13,14:91762515-91776055
(Clone quality: bE179A13 on chr=14; Num_of_Contigs=3; )
BMPR1A location ⇒ 14:91772929-91773124   CU633355,CH242-179A13,14:91762515-91776055
(Clone quality: bE179A13 on chr=14; Num_of_Contigs=3; )
BMPR1A location ⇒ 14:91774662-91774755   CU633355,CH242-179A13,14:91762515-91776055
(Clone quality: bE179A13 on chr=14; Num_of_Contigs=3; )
BMPR1B ENSSSCG00000009191 8:106689479-106700258   CU972439,CH242-452J6,8:106683308-106709026
(Clone quality: bE452J6 on chr=8; Num_of_Contigs=3; )
BMPR1B ENSSSCG00000009190 8:106584411-106606209    
BMPR1B location ⇒ 8:106583760-106583510   FP015929,CH242-210L5,8:106582166-106589625
(Clone quality: bE210L5 on chr=8; Num_of_Contigs=19; )
BMPR1B location ⇒ 8:106584577-106583815   FP015929,CH242-210L5,8:106582166-106589625
(Clone quality: bE210L5 on chr=8; Num_of_Contigs=19; )
BMPR1B location ⇒ 8:106585269-106584634   FP015929,CH242-210L5,8:106582166-106589625
(Clone quality: bE210L5 on chr=8; Num_of_Contigs=19; )
BMPR1B location ⇒ 8:106605185-106604897   FP015929,CH242-210L5,8:106604191-106606647
(Clone quality: bE210L5 on chr=8; Num_of_Contigs=19; )
BMPR2 ENSSSCG00000016113 15:99623146-99680923    
BMPR2 location ⇒ 15:99664520-99664373   CU928248,CH242-199E12,15:99636363-99737261
(Clone quality: bE199E12 on chr=15; Num_of_Contigs=4; )
BMPR2 location ⇒ 15:99670422-99670282   CU928248,CH242-199E12,15:99636363-99737261
(Clone quality: bE199E12 on chr=15; Num_of_Contigs=4; )
BMPR2 location ⇒ 15:99673508-99673335   CU928248,CH242-199E12,15:99636363-99737261
(Clone quality: bE199E12 on chr=15; Num_of_Contigs=4; )
BMPR2 location ⇒ 15:99677309-99677087   CU928248,CH242-199E12,15:99636363-99737261
(Clone quality: bE199E12 on chr=15; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-28

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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