A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
B3VN87_PIG   ENSSSCG00000017964 12:50127768-50149779   CU972380,CH242-124B22,12:50126282-50177524
(Clone quality: bE124B22 on chr=12; Num_of_Contigs=7; )
B3VN88_PIG   ENSSSCG00000007361 17:46182270-46243586    
B3VN88_PIG   ENSSSCG00000007361 17:46182270-46243586    
B3VSC7_PIG   ENSSSCG00000005145 1:210106694-210107266   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
B3VSD1_PIG   ENSSSCG00000005162 1:210545384-210545956   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
B3VSD2_PIG   ENSSSCG00000005157 1:210479503-210480075   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
B4GALNT1   ENSSSCG00000000433 5:21666829-21673922   CU896550,CH242-139E23,5:21645310-21692999
(Clone quality: bE139E23 on chr=5; Num_of_Contigs=9; )
B4GALT1   ENSSSCG00000010998 10:31842477-31900995    
B4GALT12683 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
B4GALT3   ENSSSCG00000006360 4:92786900-92792768   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
B4GALT5   ENSSSCG00000007465 17:53457297-53530713    
B4GALT7   ENSSSCG00000014035 2:69591958-69602544 FP067372,CH242-220F6,2:69483795-69614393
(Clone quality: bE220F6 on chr=2; Num_of_Contigs=8; ) 		 
B4YSE6_PIG   ENSSSCG00000012352 X:48366797-48386842   CU468339,CH242-263K3,X:48358921-48388291
(Clone quality: bE263K3 on chr=X; Num_of_Contigs=4; )
B4YSE6_PIG   ENSSSCG00000012352 X:48366797-48386842   CU468339,CH242-263K3,X:48358921-48388291
(Clone quality: bE263K3 on chr=X; Num_of_Contigs=4; )
B5AHF5_PIG   ENSSSCG00000016970 16:45048423-45086911    
B5APU3_PIG   ENSSSCG00000008358 3:70566847-70602554   CU861554,CH242-286M19,3:70506212-70650791
(Clone quality: bE286M19 on chr=3; Num_of_Contigs=1; )
B5G563_PIG   ENSSSCG00000012372 X:53477840-53477995   CU695131,CH242-263G11,X:53474428-53478259
(Clone quality: bE263G11 on chr=X; Num_of_Contigs=17; )
B5G569_PIG   ENSSSCG00000000678 5:59844511-59844648   CU457492,CH242-370K21,5:59838328-59845518
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
B5MBT7_PIG   ENSSSCG00000006337 4:91474344-91497073    
B6D5I0_PIG   ENSSSCG00000009312 11:4649144-4654599   FP236498,CH242-53H4,11:4643707-4654914
(Clone quality: bE53H4 on chr=11; Num_of_Contigs=22; )
B6EAV4_PIG   ENSSSCG00000017157 12:1364313-1384348   CU655945,CH242-412P7,12:1360053-1405040
(Clone quality: bE412P7 on chr=12; Num_of_Contigs=12; )
B6EAV4_PIG   ENSSSCG00000017153 12:1208159-1228628   CU914710,CH242-31O1,12:1194637-1253940
(Clone quality: bE31O1 on chr=12; Num_of_Contigs=4; )
B6V6V3_PIG   ENSSSCG00000008518 3:101038070-101055591    
B6V8C8_PIG   ENSSSCG00000009019 8:66993031-66997218   FP016091,CH242-139K9,8:66992670-66997386
(Clone quality: bE139K9 on chr=8; Num_of_Contigs=7; )
B6VAQ0_PIG   ENSSSCG00000000225 5:15404150-15409272    
B6VAQ0_PIG   ENSSSCG00000000221 5:15203508-15207683   CU694522,CH242-54E2,5:15201806-15208003
(Clone quality: bE54E2 on chr=5; Num_of_Contigs=10; )
B6VD07_PIG   ENSSSCG00000005693 1:284956698-284962112   CU459043,CH242-114M9,1:284900822-284986124
(Clone quality: bE114M9 on chr=1; Num_of_Contigs=4; )
B6VD07_PIG   ENSSSCG00000005675 1:284510699-284516113   CU915659,CH242-498L20,1:284505633-284516419
(Clone quality: bE498L20 on chr=1; Num_of_Contigs=6; )
B6VD07_PIG   ENSSSCG00000005693 1:284956698-284962112   CU459043,CH242-114M9,1:284900822-284986124
(Clone quality: bE114M9 on chr=1; Num_of_Contigs=4; )
B6VD07_PIG   ENSSSCG00000005675 1:284510699-284516113   CU915659,CH242-498L20,1:284505633-284516419
(Clone quality: bE498L20 on chr=1; Num_of_Contigs=6; )
B7-H3 ENSSSCG00000001917 7:65153991-65183019   CU137731,CH242-449C4,7:65113175-65198803
(Clone quality: bE449C4 on chr=7; Num_of_Contigs=5; )
B7-H4 ENSSSCG00000006731 4:107621872-107690212   CU207228,CH242-366F10,4:107617782-107740116
(Clone quality: bE366F10 on chr=4; Num_of_Contigs=2; )
B7-H4 location ⇒ 4:107698286-107697996   CU207228,CH242-366F10,4:107617782-107740116
(Clone quality: bE366F10 on chr=4; Num_of_Contigs=2; )
B7H3 ENSSSCG00000001917 7:65153991-65183019   CU137731,CH242-449C4,7:65113175-65198803
(Clone quality: bE449C4 on chr=7; Num_of_Contigs=5; )
B7U2G5_PIG   ENSSSCG00000002983 6:33276775-33281557   FP102547,CH242-120H3,6:33274211-33293000
(Clone quality: bE120H3 on chr=6; Num_of_Contigs=3; )
B7U2G5_PIG   ENSSSCG00000002983 6:33276775-33281557   FP102547,CH242-120H3,6:33274211-33293000
(Clone quality: bE120H3 on chr=6; Num_of_Contigs=3; )
B7U3Y8_PIG   ENSSSCG00000017035 16:60759315-60778109   CU571129,CH242-2E15,16:60758885-60798250
(Clone quality: bE2E15 on chr=16; Num_of_Contigs=4; )
B7U9B2_PIG   ENSSSCG00000013496 2:48379214-48383308   CU929466,CH242-60A20,2:48379010-48440195
(Clone quality: bE60A20 on chr=2; Num_of_Contigs=5; )
B7X5Y1_PIG   ENSSSCG00000002057 7:82991794-82996373   CU468882,CH242-63B2,7:82976194-83001523
(Clone quality: bE63B2 on chr=7; Num_of_Contigs=5; )
B7X5Y1_PIG   ENSSSCG00000002057 7:82991794-82996373   CU468882,CH242-63B2,7:82976194-83001523
(Clone quality: bE63B2 on chr=7; Num_of_Contigs=5; )
B7X5Y2_PIG   ENSSSCG00000002062 7:83065691-83066259   CU468882,CH242-63B2,7:83001624-83076399
(Clone quality: bE63B2 on chr=7; Num_of_Contigs=5; )
B8XSK5_PIG   ENSSSCG00000012202 X:25892517-25972494    
B8XTR4_PIG   ENSSSCG00000007014 17:10592964-10611659   CU606939,CH242-152E6,17:10539635-10615238
(Clone quality: bE152E6 on chr=17; Num_of_Contigs=8; )
B8XTR4_PIG   ENSSSCG00000007014 17:10592964-10611659   CU606939,CH242-152E6,17:10539635-10615238
(Clone quality: bE152E6 on chr=17; Num_of_Contigs=8; )
B8XTR6_PIG   ENSSSCG00000016902 16:31683804-31693408   CU570832,CH242-249C24,16:31668453-31708697
(Clone quality: bE249C24 on chr=16; Num_of_Contigs=4; )
B8XTR6_PIG   ENSSSCG00000016902 16:31683804-31693408   CU570832,CH242-249C24,16:31668453-31708697
(Clone quality: bE249C24 on chr=16; Num_of_Contigs=4; )
B8Y466_PIG   ENSSSCG00000012776 X:122546328-122550838   FP245398,CH242-390A7,X:122538375-122559094
(Clone quality: bE390A7 on chr=X; Num_of_Contigs=13; )
B8YGC0_PIG   ENSSSCG00000008258 3:59553822-59569885   CU694523,CH242-64C23,3:59539565-59569986
(Clone quality: bE64C23 on chr=3; Num_of_Contigs=16; )
B8YGC0_PIG   ENSSSCG00000008255 3:59242140-59258203   FP102293,CH242-307A4,3:59207190-59305624
(Clone quality: bE307A4 on chr=3; Num_of_Contigs=3; )
B8YQC1_PIG   ENSSSCG00000008365 3:71494632-71498415   CU928423,CH242-434F10,3:71486135-71504566
(Clone quality: bE434F10 on chr=3; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-28

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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