A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U11   ENSSSCG00000019109 8:97425817-97425950   CU694780,CH242-227M23,8:97419841-97430863
(Clone quality: bE227M23 on chr=8; Num_of_Contigs=11; )
U12   ENSSSCG00000018599 14:35603071-35603218   CT737179,CH242-7H2,14:35543952-35742587
(Clone quality: bE7H2 on chr=14; Num_of_Contigs=1; )
U12   ENSSSCG00000019768 5:2863318-2863467   CU928642,CH242-477C10,5:2845539-2874049
(Clone quality: bE477C10 on chr=5; Num_of_Contigs=6; )
U2   ENSSSCG00000019356 9:70045049-70045239   CU914741,CH242-338C5,9:70032457-70060744
(Clone quality: bE338C5 on chr=9; Num_of_Contigs=18; )
U2   ENSSSCG00000019353 7:97938310-97938500   CT737391,CH242-79D20,7:97891884-97941598
(Clone quality: bE79D20 on chr=7; Num_of_Contigs=16; )
U2   ENSSSCG00000018903 5:77826055-77826240   CU928944,CH242-147F20,5:77802229-77841232
(Clone quality: bE147F20 on chr=5; Num_of_Contigs=9; )
U2   ENSSSCG00000019042 X:100291581-100291771   FP085581,CH242-315A15,X:100276227-100303008
(Clone quality: bE315A15 on chr=X; Num_of_Contigs=9; )
U2   ENSSSCG00000019040 3:99432007-99432198   CU463194,CH242-280C22,3:99427682-99450235
(Clone quality: bE280C22 on chr=3; Num_of_Contigs=3; )
U2   ENSSSCG00000018323 6:72119956-72120146   CU457418,CH242-56G13,6:72074037-72154809
(Clone quality: bE56G13 on chr=6; Num_of_Contigs=5; )
U2   ENSSSCG00000019329 1:103798573-103798754   CU457710,CH242-73M15,1:103767165-103813026
(Clone quality: bE73M15 on chr=1; Num_of_Contigs=3; )
U2   ENSSSCG00000018578 2:67380036-67380226   CU928737,CH242-57D18,2:67376506-67381794
(Clone quality: bE57D18 on chr=2; Num_of_Contigs=12; )
U2   ENSSSCG00000019537 6:62644357-62644530   CU929602,CH242-252C17,6:62590106-62645199
(Clone quality: bE252C17 on chr=6; Num_of_Contigs=6; )
U2   ENSSSCG00000018623 2:12881796-12881986   CU856067,CH242-88B18,2:12853324-12903047
(Clone quality: bE88B18 on chr=2; Num_of_Contigs=8; )
U2   ENSSSCG00000019394 5:77762851-77763036   CU633733,CH242-92I20,5:77760533-77765837
(Clone quality: bE92I20 on chr=5; Num_of_Contigs=5; )
U2   ENSSSCG00000019278 15:104557307-104557496   CU856587,CH242-287K21,15:104537617-104562090
(Clone quality: bE287K21 on chr=15; Num_of_Contigs=3; )
U2   ENSSSCG00000019380 3:55215351-55215538   CU928335,CH242-175K7,3:55193574-55309905
(Clone quality: bE175K7 on chr=3; Num_of_Contigs=3; )
U2   ENSSSCG00000018928 X:100163567-100163757 CU655929,CH242-315L17,X:100105282-100257749
(Clone quality: bE315L17 on chr=X; Num_of_Contigs=2; ) 		 
U2   ENSSSCG00000019709 7:70696132-70696321   CU469145,CH242-277H7,7:70658994-70722256
(Clone quality: bE277H7 on chr=7; Num_of_Contigs=4; )
U2   ENSSSCG00000018330 1:171283633-171283816   CU928952,CH242-147A20,1:171279294-171285371
(Clone quality: bE147A20 on chr=1; Num_of_Contigs=20; )
U2   ENSSSCG00000018546 15:100631088-100631278   CU856435,CH242-89B15,15:100586865-100638699
(Clone quality: bE89B15 on chr=15; Num_of_Contigs=3; )
U2   ENSSSCG00000020028 16:22188570-22188768   CU570830,CH242-243K14,16:22182475-22194283
(Clone quality: bE243K14 on chr=16; Num_of_Contigs=14; )
U2   ENSSSCG00000018823 6:16188098-16188288   CU927982,CH242-66F5,6:16147447-16192300
(Clone quality: bE66F5 on chr=6; Num_of_Contigs=8; )
U2   ENSSSCG00000019869 3:5290568-5290758   FP102574,CH242-152F16,3:5276214-5309152
(No clone quality info on )
U2   ENSSSCG00000018854 8:119180826-119181015   CU466300,CH242-501G2,8:119174184-119189878
(Clone quality: bE501G2 on chr=8; Num_of_Contigs=5; )
U2   ENSSSCG00000019992 15:880690-880876   CU481866,CH242-228F2,15:853762-881000
(Clone quality: bE228F2 on chr=15; Num_of_Contigs=1; )
U2   ENSSSCG00000019892 3:5511813-5512003   FP103031,CH242-519M18,3:5502438-5515425
(Clone quality: bE519M18 on chr=3; Num_of_Contigs=12; )
U2AF1L4   ENSSSCG00000002896 6:30163228-30167976   FP243365,CH242-219O7,6:30147881-30183141
(Clone quality: bE219O7 on chr=6; Num_of_Contigs=6; )
U3   ENSSSCG00000019075 12:32936629-32936843   CU928429,CH242-88I14,12:32897787-32946034
(Clone quality: bE88I14 on chr=12; Num_of_Contigs=7; )
U3   ENSSSCG00000018741 12:32939069-32939283   CU928429,CH242-88I14,12:32897787-32946034
(Clone quality: bE88I14 on chr=12; Num_of_Contigs=7; )
U3   ENSSSCG00000019461 12:33085443-33085657   FP102481,CH242-183H13,12:33083041-33087909
(Clone quality: bE183H13 on chr=12; Num_of_Contigs=7; )
U3   ENSSSCG00000019553 14:48198039-48198249   CT956025,CH242-69C12,14:48142322-48239134
(Clone quality: bE69C12 on chr=14; Num_of_Contigs=15; )
U3   ENSSSCG00000019489 12:33081674-33081888   FP102481,CH242-183H13,12:33068991-33082940
(Clone quality: bE183H13 on chr=12; Num_of_Contigs=7; )
U3   ENSSSCG00000019510 1:283461624-283461842   CU234126,CH242-282L14,1:283459709-283463235
(Clone quality: bE282L14 on chr=1; Num_of_Contigs=4; )
U3   ENSSSCG00000019898 11:69208504-69208718   CU972472,CH242-117F14,11:69208464-69210941
(Clone quality: bE117F14 on chr=11; Num_of_Contigs=6; )
U3   ENSSSCG00000018201 12:32876164-32876378   CU928429,CH242-88I14,12:32873382-32897686
(Clone quality: bE88I14 on chr=12; Num_of_Contigs=7; )
U4   ENSSSCG00000019984 6:33363145-33363274   FP102547,CH242-120H3,6:33324884-33375806
(Clone quality: bE120H3 on chr=6; Num_of_Contigs=3; )
U4   ENSSSCG00000019983 5:36027706-36027843   CU640380,CH242-176I2,5:36024447-36043845
(Clone quality: bE176I2 on chr=5; Num_of_Contigs=11; )
U4   ENSSSCG00000019668 1:193352268-193352456   CU104729,CH242-24I13,1:193332714-193365551
(Clone quality: bE24I13 on chr=1; Num_of_Contigs=8; )
U4   ENSSSCG00000019392 18:21145897-21146040   CU972394,CH242-199M5,18:21124475-21148312
(Clone quality: bE199M5 on chr=18; Num_of_Contigs=6; )
U4   ENSSSCG00000018250 14:40427157-40427297   CU407045,CH242-216A8,14:40418683-40433147
(No clone quality info on )
U4   ENSSSCG00000019267 8:81563058-81563172   FP090913,CH242-518I9,8:81556963-81586705
(Clone quality: bE518I9 on chr=8; Num_of_Contigs=5; )
U4   ENSSSCG00000019129 X:90987911-90988056   FP102399,CH242-161L5,X:90939979-91007369
(Clone quality: bE161L5 on chr=X; Num_of_Contigs=5; )
U4   ENSSSCG00000019796 14:81839619-81839750   CT827804,CH242-237N19,14:81718473-81852205
(Clone quality: bE237N19 on chr=14; Num_of_Contigs=2; )
U4   ENSSSCG00000019423 7:92852601-92852737   CT954334,CH242-176E2,7:92830731-93021571
(Clone quality: bE176E2 on chr=7; Num_of_Contigs=2; )
U4   ENSSSCG00000018878 7:14816445-14816594   CU468854,CH242-510D3,7:14815286-14821662
(Clone quality: bE510D3 on chr=7; Num_of_Contigs=4; )
U4   ENSSSCG00000018679 18:29964149-29964291   CU914237,CH242-181O5,18:29940146-29973279
(Clone quality: bE181O5 on chr=18; Num_of_Contigs=6; )
U4   ENSSSCG00000019037 14:40426409-40426549   CU407045,CH242-216A8,14:40418683-40433147
(No clone quality info on )
U5   ENSSSCG00000018672 1:170466109-170466225   CU633232,CH242-191H9,1:170434901-170493452
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
U5   ENSSSCG00000019044 6:119446247-119446362   CU694509,CH242-156G14,6:119430975-119448889
(Clone quality: bE156G14 on chr=6; Num_of_Contigs=6; )
U5   ENSSSCG00000019094 1:170474465-170474580   CU633232,CH242-191H9,1:170434901-170493452
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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