A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ZC3H12C location ⇒ 9:37356418-37355665   CU972358,CH242-40D16,9:37353798-37383261
(Clone quality: bE40D16 on chr=9; Num_of_Contigs=2; )
ZC3H12D   ENSSSCG00000004109 1:17427345-17451645   CU459105,CH242-241M9,1:17419990-17464787
(Clone quality: bE241M9 on chr=1; Num_of_Contigs=5; )
Zc3h13 ENSSSCG00000009414 11:20676346-20758016   CU367850,CH242-196G1,11:20666137-20758943
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
ZC3H13 ENSSSCG00000009414 11:20676346-20758016   CU367850,CH242-196G1,11:20666137-20758943
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
Zc3h13 location ⇒ 11:20714495-20714567   CU367850,CH242-196G1,11:20666137-20758943
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
Zc3h13 location ⇒ 11:20729073-20729367   CU367850,CH242-196G1,11:20666137-20758943
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
Zc3h13 location ⇒ 11:20747992-20748086   CU367850,CH242-196G1,11:20666137-20758943
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
Zc3h13 location ⇒ 11:20757815-20758017   CU367850,CH242-196G1,11:20666137-20758943
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
ZC3H14   ENSSSCG00000002426 7:118332378-118379210 CT737288,CH242-131I19,7:118285286-118482376
(Clone quality: bE131I19 on chr=7; Num_of_Contigs=6; ) 		 
ZC3H15   ENSSSCG00000016026 15:85715403-85739183    
ZC3H3   ENSSSCG00000006956 4:135943369-135946038   CU655901,CH242-168F3,4:135941220-135947123
(Clone quality: bE168F3 on chr=4; Num_of_Contigs=8; )
ZC3H4   ENSSSCG00000003110 6:36636167-36675474    
ZC3H6   ENSSSCG00000008096 3:39270004-39285801    
ZC3H7A   ENSSSCG00000007891 3:28003782-28010326    
ZC3H8 ENSSSCG00000008099 3:39427946-39460842    
ZC3HAV1 ENSSSCG00000016512 18:8723320-8774887    
ZC3HC1   ENSSSCG00000016565 18:16959707-16972262    
ZCCHC11 ENSSSCG00000003859 6:113445088-113592703    
ZCCHC11 location ⇒ 6:113445708-113445146   CU929620,CH242-311I20,6:113433411-113451431
(Clone quality: bE311I20 on chr=6; Num_of_Contigs=11; )
ZCCHC11 location ⇒ 6:113449260-113448813   CU929620,CH242-311I20,6:113433411-113451431
(Clone quality: bE311I20 on chr=6; Num_of_Contigs=11; )
ZCCHC11 location ⇒ 6:113476200-113476139   CU929620,CH242-311I20,6:113451532-113486978
(Clone quality: bE311I20 on chr=6; Num_of_Contigs=11; )
ZCCHC11 location ⇒ 6:113578599-113578549   CU929620,CH242-311I20,6:113553094-113595785
(Clone quality: bE311I20 on chr=6; Num_of_Contigs=11; )
ZCCHC13   ENSSSCG00000012417 X:58804775-58805284 CU469472,CH242-188E7,X:58776519-58869318
(Clone quality: bE188E7 on chr=X; Num_of_Contigs=4; ) 		 
ZCCHC14   ENSSSCG00000002656 6:830317-866971    
ZCCHC16   ENSSSCG00000012589 X:90294253-90295182 FP015814,CH242-25L17,X:90154727-90338704
(Clone quality: bE25L17 on chr=X; Num_of_Contigs=1; ) 		 
ZCCHC2   ENSSSCG00000004897 1:165816035-165852556   CU076046,CH242-385O10,1:165814174-165909106
(Clone quality: bE385O10 on chr=1; Num_of_Contigs=6; )
ZCCHC3   ENSSSCG00000007211 17:36818972-36820180   CU606854,CH242-254I19,17:36811565-36835886
(Clone quality: bE254I19 on chr=17; Num_of_Contigs=11; )
ZCCHC6 ENSSSCG00000010952 10:27844580-27909858   CU694299,CH242-250G4,10:27769603-27962750
(Clone quality: bE250G4 on chr=10; Num_of_Contigs=2; )
ZCCHC7 ENSSSCG00000005346 1:249228293-249470420    
ZCCHC7 location ⇒ 1:249204370-249204505   CU928778,CH242-399B11,1:249200715-249204985
(Clone quality: bE399B11 on chr=1; Num_of_Contigs=9; )
ZCCHC7 location ⇒ 1:249228280-249228903   CU861930,CH242-164L13,1:249224932-249247115
(Clone quality: bE164L13 on chr=1; Num_of_Contigs=3; )
ZCCHC7 location ⇒ 1:249462022-249462119   CU855828,CH242-133D9,1:249414677-249476249
(Clone quality: bE133D9 on chr=1; Num_of_Contigs=6; )
ZCCHC7 location ⇒ 1:249471371-249471434   CU855828,CH242-133D9,1:249414677-249476249
(Clone quality: bE133D9 on chr=1; Num_of_Contigs=6; )
ZCCHC8   ENSSSCG00000009792 14:30236476-30257234    
ZCCHC9   ENSSSCG00000014129 2:79157997-79167071   CU928538,CH242-480H13,2:79123623-79184234
(Clone quality: bE480H13 on chr=2; Num_of_Contigs=8; )
ZCRB1   ENSSSCG00000000792 5:69633907-69637848    
ZCWCC3 ENSSSCG00000012055 13:140427067-140468401   CU638724,CH242-250N17,13:140388607-140500268
(Clone quality: bE250N17 on chr=13; Num_of_Contigs=2; )
ZCWPW1   ENSSSCG00000007659 3:6655801-6688203    
ZDBF2   ENSSSCG00000016130 15:102355337-102358519   CU467535,CH242-21E18,15:102344575-102428118
(Clone quality: bE21E18 on chr=15; Num_of_Contigs=4; )
ZDHHC1   ENSSSCG00000002778 6:13142969-13164561   CU929737,CH242-250E5,6:13062455-13202086
(Clone quality: bE250E5 on chr=6; Num_of_Contigs=3; )
ZDHHC12   ENSSSCG00000005658 1:283763150-283764444    
ZDHHC13 ENSSSCG00000013353 2:37428248-37453924    
ZDHHC13 location ⇒ 2:37428246-37428383   CU929970,CH242-88H14,2:37425526-37441298
(Clone quality: bE88H14 on chr=2; Num_of_Contigs=9; )
ZDHHC13 location ⇒ 2:37454252-37454409   CU929970,CH242-88H14,2:37441399-37460374
(Clone quality: bE88H14 on chr=2; Num_of_Contigs=9; )
ZDHHC13 location ⇒ 2:37501844-37501913   CU929490,CH242-88D19,2:37495550-37505730
(Clone quality: bE88D19 on chr=2; Num_of_Contigs=15; )
ZDHHC13 location ⇒ 2:37504740-37504904   CU929490,CH242-88D19,2:37495550-37505730
(Clone quality: bE88D19 on chr=2; Num_of_Contigs=15; )
ZDHHC14   ENSSSCG00000004062 1:10482848-10554369    
ZDHHC15   ENSSSCG00000012426 X:60006587-60054215    
ZDHHC16   ENSSSCG00000008763 8:18135852-18136981   CU915642,CH242-24H19,8:18114763-18139537
(Clone quality: bE24H19 on chr=8; Num_of_Contigs=2; )
ZDHHC17   ENSSSCG00000000952 5:97375811-97439529    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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