A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ZDHHC18   ENSSSCG00000003561 6:57822584-57849318    
ZDHHC19   ENSSSCG00000011847 13:100677915-100689006 CU695181,CH242-182C12,13:100594044-100802412
(Clone quality: bE182C12 on chr=13; Num_of_Contigs=21; ) 		 
ZDHHC2   ENSSSCG00000006982 17:4632474-4668850    
ZDHHC21   ENSSSCG00000005188 1:217179789-217188500    
ZDHHC22   ENSSSCG00000002394 7:108209313-108216186   CU012040,CH242-394H10,7:108038511-108238028
(Clone quality: bE394H10 on chr=7; Num_of_Contigs=3; )
ZDHHC23   ENSSSCG00000011914 13:108945752-108955271   FP236287,CH242-278E9,13:108928711-108958625
(Clone quality: bE278E9 on chr=13; Num_of_Contigs=9; )
ZDHHC24   ENSSSCG00000012947 2:4396631-4404003    
ZDHHC3 ENSSSCG00000011303 13:23786150-23786637   CU633692,CH242-274A14,13:23781823-23804847
(Clone quality: bE274A14 on chr=13; Num_of_Contigs=14; )
ZDHHC3 ENSSSCG00000011301 13:23596004-23655601    
ZDHHC3 location ⇒ 13:1564908-1564962   CU633554,CH242-199A15,13:1536369-1697112
(Clone quality: bE199A15 on chr=13; Num_of_Contigs=1; )
ZDHHC3 location ⇒ 13:23621337-23621668   CU915630,CH242-217H9,13:23584905-23629787
(Clone quality: bE217H9 on chr=13; Num_of_Contigs=4; )
ZDHHC3 location ⇒ 13:23742778-23742841   CU633692,CH242-274A14,13:23721701-23747404
(Clone quality: bE274A14 on chr=13; Num_of_Contigs=14; )
ZDHHC3 location ⇒ 13:23747271-23747341   CU633692,CH242-274A14,13:23721701-23747404
(Clone quality: bE274A14 on chr=13; Num_of_Contigs=14; )
ZDHHC5   ENSSSCG00000013178 2:11257012-11275126   CU914175,CH242-140O21,2:11248278-11317852
(Clone quality: bE140O21 on chr=2; Num_of_Contigs=3; )
ZDHHC7   ENSSSCG00000002667 6:2350755-2381053   FP102505,CH242-58M15,6:2350539-2390641
(Clone quality: bE58M15 on chr=6; Num_of_Contigs=8; )
ZDHHC8   ENSSSCG00000010138 14:52757424-52769401   CT737345,CH242-178J1,14:52723116-52857619
(Clone quality: bE178J1 on chr=14; Num_of_Contigs=3; )
ZDHHC9   ENSSSCG00000012653 X:104564003-104594822    
ZEB1 ENSSSCG00000011025 10:40357121-40554534    
ZER1   ENSSSCG00000005659 1:283774905-283798601    
ZFAND2A   ENSSSCG00000007554 3:519318-526836    
ZFAND2B   ENSSSCG00000016208 15:114229987-114242067    
ZFAND3   ENSSSCG00000001584 7:38577004-38659336 CT737349,CH242-21M14,7:38538462-38739159
(Clone quality: bE21M14 on chr=7; Num_of_Contigs=3; ) 		 
ZFAND5 ENSSSCG00000005264 1:236108799-236118605   CU469484,CH242-467O18,1:236102700-236122693
(Clone quality: bE467O18 on chr=1; Num_of_Contigs=26; )
ZFAND5 location ⇒ 1:236113472-236113633   CU469484,CH242-467O18,1:236102700-236122693
(Clone quality: bE467O18 on chr=1; Num_of_Contigs=26; )
ZFAND5 location ⇒ 1:236114079-236114191   CU469484,CH242-467O18,1:236102700-236122693
(Clone quality: bE467O18 on chr=1; Num_of_Contigs=26; )
ZFAND5 location ⇒ 1:236116996-236117124   CU469484,CH242-467O18,1:236102700-236122693
(Clone quality: bE467O18 on chr=1; Num_of_Contigs=26; )
ZFAND5 location ⇒ 1:236117819-236119638   CU469484,CH242-467O18,1:236102700-236122693
(Clone quality: bE467O18 on chr=1; Num_of_Contigs=26; )
ZFAND6   ENSSSCG00000001779 7:54972717-55039562    
ZFAT   ENSSSCG00000005942 4:5827325-5954345    
ZFHX2   ENSSSCG00000002017 7:81906428-81907345   CU468006,CH242-243D20,7:81897369-81907469
(Clone quality: bE243D20 on chr=7; Num_of_Contigs=16; )
ZFHX4   ENSSSCG00000006169 4:61611377-61777388    
ZFP1   ENSSSCG00000008670 3:123224090-123235801    
ZFP106   ENSSSCG00000004725 1:135071624-135133907   CU929677,CH242-104I21,1:135068779-135136659
(Clone quality: bE104I21 on chr=1; Num_of_Contigs=5; )
ZFP112   ENSSSCG00000003077 6:35525594-35543418   FP102599,CH242-174G2,6:35504619-35566261
(Clone quality: bE174G2 on chr=6; Num_of_Contigs=4; )
ZFP14 ENSSSCG00000002934 6:31123577-31135978   CU929594,CH242-228C18,6:31122667-31265021
(Clone quality: bE228C18 on chr=6; Num_of_Contigs=3; )
ZFP30 ENSSSCG00000002940 6:31931677-31953785    
ZFP30 location ⇒ 6:31653936-31653994   FP236141,CH242-262N14,6:31644666-31666408
(Clone quality: bE262N14 on chr=6; Num_of_Contigs=6; )
ZFP30 location ⇒ 6:32081535-32081596   CU694701,CH242-276E15,6:32066842-32093230
(Clone quality: bE276E15 on chr=6; Num_of_Contigs=4; )
ZFP30 location ⇒ 6:32081713-32081840   CU694701,CH242-276E15,6:32066842-32093230
(Clone quality: bE276E15 on chr=6; Num_of_Contigs=4; )
ZFP30 location ⇒ 6:33514122-33514061   FP102369,CH242-128M4,6:33511086-33521905
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
ZFP36 ENSSSCG00000010708 14:138675810-138677628   FP236263,CH242-159G20,14:138675392-138684323
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
ZFP36L1 ENSSSCG00000002302 7:101018079-101019029   CU683824,CH242-124P13,7:101006661-101044236
(Clone quality: bE124P13 on chr=7; Num_of_Contigs=3; )
ZFP36L1 location ⇒ 7:101018068-101019510   CU683824,CH242-124P13,7:101006661-101044236
(Clone quality: bE124P13 on chr=7; Num_of_Contigs=3; )
ZFP36L1 location ⇒ 7:101019662-101019839   CU683824,CH242-124P13,7:101006661-101044236
(Clone quality: bE124P13 on chr=7; Num_of_Contigs=3; )
ZFP36L1 location ⇒ 7:101019991-101020357   CU683824,CH242-124P13,7:101006661-101044236
(Clone quality: bE124P13 on chr=7; Num_of_Contigs=3; )
ZFP36L1 location ⇒ 7:101020481-101020917   CU683824,CH242-124P13,7:101006661-101044236
(Clone quality: bE124P13 on chr=7; Num_of_Contigs=3; )
ZFP36L2   ENSSSCG00000008461 3:90710274-90712592   CU928663,CH242-315B8,3:90710082-90712784
(Clone quality: bE315B8 on chr=3; Num_of_Contigs=3; )
ZFP36L2678 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
ZFP37   ENSSSCG00000005475 1:266624371-266651311   CU856416,CH242-238G19,1:266606746-266683092
(Clone quality: bE238G19 on chr=1; Num_of_Contigs=3; )
ZFP42   ENSSSCG00000006999 17:7221422-7222321   CU606978,CH242-286D19,17:7214122-7230295
(Clone quality: bE286D19 on chr=17; Num_of_Contigs=12; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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