A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U6   ENSSSCG00000019925 16:48624823-48624926   CU915673,CH242-496E1,16:48609551-48626844
(Clone quality: bE496E1 on chr=16; Num_of_Contigs=8; )
U6   ENSSSCG00000019562 11:70110883-70110989   CU856002,CH242-1K11,11:70047507-70136190
(Clone quality: bE1K11 on chr=11; Num_of_Contigs=4; )
U6   ENSSSCG00000019689 3:101673225-101673332   CU468398,CH242-214G14,3:101672084-101696936
(Clone quality: bE214G14 on chr=3; Num_of_Contigs=4; )
U6   ENSSSCG00000019710 1:179654114-179654220   CU606899,CH242-265I6,1:179652055-179662105
(Clone quality: bE265I6 on chr=1; Num_of_Contigs=9; )
U6   ENSSSCG00000019712 X:97095570-97095673 CU928929,CH242-445E7,X:97050124-97103584
(Clone quality: bE445E7 on chr=X; Num_of_Contigs=7; ) 		 
U6   ENSSSCG00000019805 9:87033401-87033507   CU915624,CH242-101D9,9:86992843-87038365
(Clone quality: bE101D9 on chr=9; Num_of_Contigs=2; )
U6   ENSSSCG00000019801 1:140481659-140481765   CU633272,CH242-302C18,1:140469568-140488897
(Clone quality: bE302C18 on chr=1; Num_of_Contigs=12; )
U6   ENSSSCG00000019717 1:187375672-187375778   CU222529,CH242-247H18,1:187219894-187410036
(Clone quality: bE247H18 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000019799 9:118600925-118601031   CU915492,CH242-37F23,9:118575869-118613599
(Clone quality: bE37F23 on chr=9; Num_of_Contigs=8; )
U6   ENSSSCG00000019718 2:12783803-12783906   CU856067,CH242-88B18,2:12782953-12796892
(Clone quality: bE88B18 on chr=2; Num_of_Contigs=8; )
U6   ENSSSCG00000019720 8:104545859-104545961   CU633175,CH242-27O17,8:104539627-104562530
(Clone quality: bE27O17 on chr=8; Num_of_Contigs=3; )
U6   ENSSSCG00000019920 14:32927165-32927273   CU468489,CH242-352L7,14:32836937-32998018
(Clone quality: bE352L7 on chr=14; Num_of_Contigs=2; )
U6   ENSSSCG00000019434 1:27359897-27359996   CU457402,CH242-189P20,1:27348176-27448920
(Clone quality: bE189P20 on chr=1; Num_of_Contigs=3; )
U6   ENSSSCG00000019426 3:28557099-28557202   CU467545,CH242-258E10,3:28545348-28561550
(Clone quality: bE258E10 on chr=3; Num_of_Contigs=21; )
U6   ENSSSCG00000019438 15:106091157-106091263   CU694911,CH242-42I19,15:106087749-106101918
(Clone quality: bE42I19 on chr=15; Num_of_Contigs=2; )
U6   ENSSSCG00000019437 8:86949476-86949579   CU915467,CH242-239F8,8:86940114-86970384
(Clone quality: bE239F8 on chr=8; Num_of_Contigs=10; )
U6   ENSSSCG00000019436 7:48797098-48797200   CU607063,CH242-261A14,7:48793335-48808848
(Clone quality: bE261A14 on chr=7; Num_of_Contigs=10; )
U6   ENSSSCG00000019412 14:64344762-64344868   CU468371,CH242-88P20,14:64298368-64394581
(Clone quality: bE88P20 on chr=14; Num_of_Contigs=3; )
U6   ENSSSCG00000019936 13:15261268-15261373   CU861539,CH242-209O3,13:15260252-15362213
(Clone quality: bE209O3 on chr=13; Num_of_Contigs=2; )
U6   ENSSSCG00000019413 14:89580670-89580771   CT827840,CH242-23L9,14:89500858-89683173
(Clone quality: bE23L9 on chr=14; Num_of_Contigs=1; )
U6   ENSSSCG00000019417 6:104631728-104631834   FP236543,CH242-214C11,6:104591219-104678111
(Clone quality: bE214C11 on chr=6; Num_of_Contigs=3; )
U6   ENSSSCG00000019419 6:94772836-94772942   CU915644,CH242-277O14,6:94753681-94782724
(Clone quality: bE277O14 on chr=6; Num_of_Contigs=8; )
U6   ENSSSCG00000019424 4:42960999-42961105   CU468807,CH242-136N10,4:42929356-42972423
(Clone quality: bE136N10 on chr=4; Num_of_Contigs=5; )
U6   ENSSSCG00000019425 6:17950402-17950507   CU457404,CH242-223K19,6:17851061-17984695
(Clone quality: bE223K19 on chr=6; Num_of_Contigs=1; )
U6   ENSSSCG00000019721 6:9585893-9585998   CU929739,CH242-254K22,6:9562525-9625893
(Clone quality: bE254K22 on chr=6; Num_of_Contigs=9; )
U6   ENSSSCG00000019807 18:20158507-20158613   CU856217,CH242-237M1,18:20138153-20160783
(Clone quality: bE237M1 on chr=18; Num_of_Contigs=16; )
U6   ENSSSCG00000019793 13:135403439-135403546   CU855651,CH242-286F10,13:135305610-135405108
(Clone quality: bE286F10 on chr=13; Num_of_Contigs=2; )
U6   ENSSSCG00000019764 4:125782024-125782129   FP085536,CH242-405F15,4:125773770-125786269
(Clone quality: bE405F15 on chr=4; Num_of_Contigs=16; )
U6   ENSSSCG00000019792 1:196275517-196275623   CU582907,CH242-119K11,1:196211223-196387617
(Clone quality: bE119K11 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000019765 16:32431034-32431140   CU929824,CH242-50P12,16:32418978-32453026
(Clone quality: bE50P12 on chr=16; Num_of_Contigs=16; )
U6   ENSSSCG00000019766 4:54493767-54493869   CU179669,CH242-239L1,4:54440515-54542311
(Clone quality: bE239L1 on chr=4; Num_of_Contigs=5; )
U6   ENSSSCG00000019770 7:20722452-20722557   CT737315,CH242-160B2,7:20607639-20790901
(Clone quality: bE160B2 on chr=7; Num_of_Contigs=1; )
U6   ENSSSCG00000019778 1:32502987-32503090   CU041311,CH242-393L4,1:32405122-32529539
(Clone quality: bE393L4 on chr=1; Num_of_Contigs=2; )
U6   ENSSSCG00000019784 2:52179240-52179341   CU856608,CH242-517F5,2:52162696-52188481
(Clone quality: bE517F5 on chr=2; Num_of_Contigs=7; )
U6   ENSSSCG00000019785 5:70890508-70890614   FP102342,PigI-719A6,5:70839195-70984027
(Clone quality: bI719A6 on chr=5; Num_of_Contigs=1; )
U6   ENSSSCG00000019761 10:12020474-12020574   FP236746,CH242-115K6,10:12000562-12050827
(Clone quality: bE115K6 on chr=10; Num_of_Contigs=10; )
U6   ENSSSCG00000019726 6:80295767-80295872   CU467523,CH242-187M19,6:80269279-80312393
(Clone quality: bE187M19 on chr=6; Num_of_Contigs=7; )
U6   ENSSSCG00000019795 5:20709308-20709408   CU498845,CH242-111P13,5:20699391-20717983
(Clone quality: bE111P13 on chr=5; Num_of_Contigs=18; )
U6   ENSSSCG00000019704 9:69742077-69742183   CU928532,CH242-382J8,9:69741317-69745615
(Clone quality: bE382J8 on chr=9; Num_of_Contigs=17; )
U6   ENSSSCG00000019705 15:101391466-101391572   CU469507,CH242-378C11,15:101390341-101400197
(Clone quality: bE378C11 on chr=15; Num_of_Contigs=12; )
U6   ENSSSCG00000019813 13:106294740-106294847   CU633666,CH242-229M20,13:106279906-106390202
(Clone quality: bE229M20 on chr=13; Num_of_Contigs=2; )
U6   ENSSSCG00000019690 2:124115343-124115449   CU928302,CH242-266O13,2:124032962-124185534
(Clone quality: bE266O13 on chr=2; Num_of_Contigs=2; )
U6   ENSSSCG00000019691 15:51463809-51463914   FP236189,CH242-81L5,15:51442026-51475028
(Clone quality: bE81L5 on chr=15; Num_of_Contigs=7; )
U6   ENSSSCG00000019692 2:41264314-41264407   CU928260,CH242-273B21,2:41257577-41300655
(Clone quality: bE273B21 on chr=2; Num_of_Contigs=3; )
U6   ENSSSCG00000019694 14:129238163-129238269 CT737264,CH242-195A3,14:129208930-129389390
(Clone quality: bE195A3 on chr=14; Num_of_Contigs=1; ) 		 
U6   ENSSSCG00000019695 13:47220650-47220756   FP085479,CH242-132G16,13:47186417-47234157
(Clone quality: bE132G16 on chr=13; Num_of_Contigs=6; )
U6   ENSSSCG00000019815 9:16277659-16277766   FP091242,CH242-509H20,9:16117997-16342882
(Clone quality: bE509H20 on chr=9; Num_of_Contigs=1; )
U6   ENSSSCG00000019701 1:264076675-264076777   CU570955,CH242-478J3,1:264042831-264213497
(Clone quality: bE478J3 on chr=1; Num_of_Contigs=3; )
U6   ENSSSCG00000019702 2:52531711-52531817   FP102365,CH242-142P24,2:52527615-52533000
(Clone quality: bE142P24 on chr=2; Num_of_Contigs=4; )
U6   ENSSSCG00000019759 6:64822383-64822489 CR956385,CH242-177A17,6:64646719-64826929
(Clone quality: bE177A17 on chr=6; Num_of_Contigs=4; ) 		 
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team