A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U6   ENSSSCG00000019889 3:62504990-62505096   FP067339,CH242-166D11,3:62492321-62508122
(Clone quality: bE166D11 on chr=3; Num_of_Contigs=11; )
U6   ENSSSCG00000019519 3:63363168-63363272   CU929887,CH242-215C22,3:63336671-63373209
(Clone quality: bE215C22 on chr=3; Num_of_Contigs=7; )
U6   ENSSSCG00000019524 12:45670075-45670182   CU469128,CH242-180H19,12:45628497-45673007
(Clone quality: bE180H19 on chr=12; Num_of_Contigs=4; )
U6   ENSSSCG00000019525 7:55379660-55379766   CT757497,CH242-23B13,7:55323924-55469741
(Clone quality: bE23B13 on chr=7; Num_of_Contigs=1; )
U6   ENSSSCG00000019560 15:120216776-120216886   CU856424,CH242-121J18,15:120194602-120233615
(Clone quality: bE121J18 on chr=15; Num_of_Contigs=7; )
U6   ENSSSCG00000019368 4:107498959-107499064   CU137736,CH242-74K20,4:107390302-107520445
(Clone quality: bE74K20 on chr=4; Num_of_Contigs=2; )
U6   ENSSSCG00000019945 3:25566213-25566321   FP102568,CH242-151A8,3:25543285-25576970
(Clone quality: bE151A8 on chr=3; Num_of_Contigs=8; )
U6   ENSSSCG00000019943 16:70324160-70324263   FP085582,CH242-153F4,16:70298533-70328167
(Clone quality: bE153F4 on chr=16; Num_of_Contigs=5; )
U6   ENSSSCG00000019391 15:60292662-60292768   CU468991,CH242-236D6,15:60235908-60310355
(Clone quality: bE236D6 on chr=15; Num_of_Contigs=2; )
U6   ENSSSCG00000019940 7:32642175-32642285   CU467664,CH242-118K17,7:32610800-32709512
(Clone quality: bE118K17 on chr=7; Num_of_Contigs=3; )
U6   ENSSSCG00000019397 10:9956021-9956126   CU861957,CH242-244D10,10:9945371-9981626
(Clone quality: bE244D10 on chr=10; Num_of_Contigs=6; )
U6   ENSSSCG00000019515 6:107703459-107703563   CU656030,CH242-69I11,6:107625833-107714700
(Clone quality: bE69I11 on chr=6; Num_of_Contigs=8; )
U6   ENSSSCG00000019512 13:90276465-90276568   CU582920,CH242-292I17,13:90197484-90315587
(Clone quality: bE292I17 on chr=13; Num_of_Contigs=3; )
U6   ENSSSCG00000019511 3:53465509-53465615   FP236635,CH242-106E5,3:53462205-53467710
(Clone quality: bE106E5 on chr=3; Num_of_Contigs=2; )
U6   ENSSSCG00000019554 17:51036078-51036177   CU062639,CH242-133H10,17:51032821-51036412
(Clone quality: bE133H10 on chr=17; Num_of_Contigs=23; )
U6   ENSSSCG00000019887 X:54689306-54689412   CU469168,CH242-520P3,X:54681007-54690834
(Clone quality: bE520P3 on chr=X; Num_of_Contigs=10; )
U6   ENSSSCG00000019557 17:22516931-22517038   CU855635,CH242-196F11,17:22502051-22525682
(Clone quality: bE196F11 on chr=17; Num_of_Contigs=5; )
U6   ENSSSCG00000019871 17:28716065-28716171   CU606933,CH242-5D9,17:28713830-28720687
(Clone quality: bE5D9 on chr=17; Num_of_Contigs=4; )
U6   ENSSSCG00000019536 15:19864063-19864169   CU914387,CH242-32J2,15:19863884-19872791
(Clone quality: bE32J2 on chr=15; Num_of_Contigs=6; )
U6   ENSSSCG00000019533 6:78778725-78778831   CU656019,CH242-383P10,6:78772175-78792365
(Clone quality: bE383P10 on chr=6; Num_of_Contigs=7; )
U6   ENSSSCG00000019891 X:93242713-93242819 CU856402,CH242-196M5,X:93189762-93353511
(Clone quality: bE196M5 on chr=X; Num_of_Contigs=2; ) 		 
U6   ENSSSCG00000019502 1:223951164-223951270   CU041249,CH242-40J17,1:223809826-224010665
(Clone quality: bE40J17 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000019508 14:6602435-6602541   CU468634,CH242-272G24,14:6599886-6611548
(Clone quality: bE272G24 on chr=14; Num_of_Contigs=7; )
U6   ENSSSCG00000019893 1:76309285-76309391   CU655992,CH242-277B2,1:76293801-76324293
(Clone quality: bE277B2 on chr=1; Num_of_Contigs=15; )
U6   ENSSSCG00000019398 5:74712317-74712424   CU457487,CH242-169N19,5:74687485-74722426
(Clone quality: bE169N19 on chr=5; Num_of_Contigs=12; )
U6   ENSSSCG00000019400 4:38139429-38139534   CU234168,CH242-434N10,4:38008537-38196950
(Clone quality: bE434N10 on chr=4; Num_of_Contigs=1; )
U6   ENSSSCG00000019948 16:19386115-19386221   CU463942,CH242-215O5,16:19340220-19392117
(Clone quality: bE215O5 on chr=16; Num_of_Contigs=7; )
U6   ENSSSCG00000019406 3:80961120-80961226   CU467724,CH242-302B19,3:80907559-81018836
(Clone quality: bE302B19 on chr=3; Num_of_Contigs=3; )
U6   ENSSSCG00000019410 X:7778378-7778485 CU570744,CH242-349D19,X:7760506-7782532
(Clone quality: bE349D19 on chr=X; Num_of_Contigs=6; ) 		 
U6   ENSSSCG00000019440 14:43790559-43790664   CT954206,CH242-192N22,14:43755326-43804705
(Clone quality: bE192N22 on chr=14; Num_of_Contigs=4; )
U6   ENSSSCG00000019442 1:54391874-54391980   CU234124,CH242-263P12,1:54365334-54447579
(Clone quality: bE263P12 on chr=1; Num_of_Contigs=3; )
U6   ENSSSCG00000019443 2:37767552-37767659   CU915335,CH242-299H5,2:37755226-37768871
(Clone quality: bE299H5 on chr=2; Num_of_Contigs=5; )
U6   ENSSSCG00000019445 4:93761980-93762080 CU138477,CH242-105O19,4:93708821-93889364
(Clone quality: bE105O19 on chr=4; Num_of_Contigs=5; ) 		 
U6   ENSSSCG00000019932 1:81625323-81625429   CU210911,CH242-82A3,1:81563171-81631807
(Clone quality: bE82A3 on chr=1; Num_of_Contigs=4; )
U6   ENSSSCG00000019447 3:33360032-33360138   FP102407,CH242-29D8,3:33351815-33365356
(Clone quality: bE29D8 on chr=3; Num_of_Contigs=10; )
U6   ENSSSCG00000019931 X:79801272-79801378 FP236265,CH242-366C18,X:79784581-79821496
(Clone quality: bE366C18 on chr=X; Num_of_Contigs=5; ) 		 
U6   ENSSSCG00000019385 7:29848284-29848387 CT954213,CH242-302K12,7:29764539-29940638
(Clone quality: bE302K12 on chr=7; Num_of_Contigs=1; ) 		 
U6   ENSSSCG00000019950 11:62778194-62778300   CU013519,CH242-314K14,11:62749070-62803936
(Clone quality: bE314K14 on chr=11; Num_of_Contigs=1; )
U6   ENSSSCG00000019384 3:52086611-52086717   FP102542,CH242-108N5,3:52055736-52099463
(Clone quality: bE108N5 on chr=3; Num_of_Contigs=4; )
U6   ENSSSCG00000019403 9:9091605-9091711   FP102910,CH242-512P3,9:9091444-9095702
(Clone quality: bE512P3 on chr=9; Num_of_Contigs=6; )
U6   ENSSSCG00000019938 10:20542039-20542145   CU571347,CH242-195A5,10:20510777-20666060
(Clone quality: bE195A5 on chr=10; Num_of_Contigs=1; )
U6   ENSSSCG00000019390 1:136836559-136836664   CU571034,CH242-27B2,1:136834227-136844144
(Clone quality: bE27B2 on chr=1; Num_of_Contigs=24; )
U6   ENSSSCG00000019947 5:28990551-28990660   CU914701,CH242-243G1,5:28977409-29009446
(Clone quality: bE243G1 on chr=5; Num_of_Contigs=4; )
U6   ENSSSCG00000019387 13:47972969-47973070   FP236294,CH242-126M22,13:47901034-48022094
(Clone quality: bE126M22 on chr=13; Num_of_Contigs=5; )
U6   ENSSSCG00000019372 14:88763721-88763826   CU633218,CH242-144B15,14:88679736-88865867
(Clone quality: bE144B15 on chr=14; Num_of_Contigs=2; )
U6   ENSSSCG00000019374 5:49699660-49699766   CU633289,CH242-396D5,5:49696019-49701975
(Clone quality: bE396D5 on chr=5; Num_of_Contigs=9; )
U6   ENSSSCG00000019377 1:117650401-117650497   CU633518,CH242-477B4,1:117640339-117667512
(Clone quality: bE477B4 on chr=1; Num_of_Contigs=5; )
U6   ENSSSCG00000019951 3:43158880-43158986   CU469416,CH242-209K6,3:43139229-43200764
(Clone quality: bE209K6 on chr=3; Num_of_Contigs=7; )
U6   ENSSSCG00000019381 14:138604590-138604695   FP236263,CH242-159G20,14:138601735-138609805
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
U6   ENSSSCG00000019929 1:136324732-136324834   CU633572,CH242-274F1,1:136322507-136332481
(Clone quality: bE274F1 on chr=1; Num_of_Contigs=12; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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