A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
BIRC4 location ⇒ X:1319-1250   FP236733,PigE-245C13,X:1-2951
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
BIRC4 location ⇒ X:37625-37721   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
BIRC4 location ⇒ X:44491-44556   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
BIRC4 location ⇒ X:5622-5553   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
BIRC6 ENSSSCG00000008513 3:100630140-100673702   CU927972,CH242-371H11,3:100509967-100674276
(Clone quality: bE371H11 on chr=3; Num_of_Contigs=1; )
BIRC8 ENSSSCG00000012641 X:99194417-99194632   CU463995,CH242-82J8,X:99189489-99242893
(Clone quality: bE82J8 on chr=X; Num_of_Contigs=8; )
BIVM   ENSSSCG00000009534 11:72039365-72044501   CU469267,CH242-303L11,11:72035771-72045818
(Clone quality: bE303L11 on chr=11; Num_of_Contigs=25; )
BL11 ENSSSCG00000001059 7:10571782-10589831    
BLAST ENSSSCG00000006379 4:93278346-93292708   CU915315,CH242-208F9,4:93261946-93408226
(Clone quality: bE208F9 on chr=4; Num_of_Contigs=2; )
BLCAP   ENSSSCG00000007335 17:42971319-42971900   CU024884,CH242-24B10,17:42961281-43020437
(Clone quality: bE24B10 on chr=17; Num_of_Contigs=8; )
BLEYI-L location ⇒ 2:62079694-62079136   CU928970,CH242-349K2,2:62018597-62084904
(Clone quality: bE349K2 on chr=2; Num_of_Contigs=3; )
BLEYI-L location ⇒ 2:62080764-62080566   CU928970,CH242-349K2,2:62018597-62084904
(Clone quality: bE349K2 on chr=2; Num_of_Contigs=3; )
BLK location ⇒ 4:78691964-78691877   CU407092,CH242-518H24,4:78680536-78719082
(Clone quality: bE518H24 on chr=4; Num_of_Contigs=5; )
BLK location ⇒ 4:78727261-78727159   CU407092,CH242-518H24,4:78719183-78734845
(Clone quality: bE518H24 on chr=4; Num_of_Contigs=5; )
BLM ENSSSCG00000017796 12:44286140-44308951    
BLM ENSSSCG00000010961 10:29832674-29834545   CU466492,CH242-473A14,10:29801163-29835911
(Clone quality: bE473A14 on chr=10; Num_of_Contigs=8; )
BLM ENSSSCG00000007900 3:28395589-28400121   FP102689,CH242-377M20,3:28376954-28403624
(Clone quality: bE377M20 on chr=3; Num_of_Contigs=4; )
BLM ENSSSCG00000001816 7:58919231-58953476   CT757491,CH242-22B14,7:58919054-59000908
(Clone quality: bE22B14 on chr=7; Num_of_Contigs=5; )
BLM location ⇒ 7:58934703-58934844   CT757491,CH242-22B14,7:58919054-59000908
(Clone quality: bE22B14 on chr=7; Num_of_Contigs=5; )
BLM location ⇒ 7:58942344-58942547   CT757491,CH242-22B14,7:58919054-59000908
(Clone quality: bE22B14 on chr=7; Num_of_Contigs=5; )
BLM location ⇒ 7:58943104-58943300   CT757491,CH242-22B14,7:58919054-59000908
(Clone quality: bE22B14 on chr=7; Num_of_Contigs=5; )
BLM location ⇒ 7:58946568-58946693   CT757491,CH242-22B14,7:58919054-59000908
(Clone quality: bE22B14 on chr=7; Num_of_Contigs=5; )
BLMH   ENSSSCG00000017796 12:44286140-44308951    
BLNK ENSSSCG00000010504 14:112687323-112772205 CT737311,CH242-112I21,14:112660177-112803552
(Clone quality: bE112I21 on chr=14; Num_of_Contigs=1; ) 		 
BLNK location ⇒ 14:112687728-112687471 CT737311,CH242-112I21,14:112660177-112803552
(Clone quality: bE112I21 on chr=14; Num_of_Contigs=1; ) 		 
BLNK location ⇒ 14:112722546-112722365 CT737311,CH242-112I21,14:112660177-112803552
(Clone quality: bE112I21 on chr=14; Num_of_Contigs=1; ) 		 
BLNK location ⇒ 14:112772204-112771997 CT737311,CH242-112I21,14:112660177-112803552
(Clone quality: bE112I21 on chr=14; Num_of_Contigs=1; ) 		 
BLNK location ⇒ 14:112896984-112896777   CU424484,CH242-268F22,14:112891685-112906987
(Clone quality: bE268F22 on chr=14; Num_of_Contigs=10; )
BLOC1S1   ENSSSCG00000000359 5:20064023-20067901   CU855487,CH242-124H13,5:20045739-20096880
(Clone quality: bE124H13 on chr=5; Num_of_Contigs=8; )
BLOC1S2   ENSSSCG00000010551 14:116259893-116266316    
BLR1 ENSSSCG00000015098 9:44724736-44735301   FP089499,CH242-36G7,9:44609302-44750256
(Clone quality: bE36G7 on chr=9; Num_of_Contigs=3; )
BLR1 location ⇒ 9:44736234-44736678   FP089499,CH242-36G7,9:44609302-44750256
(Clone quality: bE36G7 on chr=9; Num_of_Contigs=3; )
BLR1 location ⇒ 9:44736726-44736968   FP089499,CH242-36G7,9:44609302-44750256
(Clone quality: bE36G7 on chr=9; Num_of_Contigs=3; )
BLVRA ENSSSCG00000016756 18:49674046-49727941    
BMDP location ⇒ 8:112353654-112353402   FP102736,CH242-59D16,8:112352872-112356799
(Clone quality: bE59D16 on chr=8; Num_of_Contigs=17; )
BMDP location ⇒ 8:112442412-112442664   CU928800,CH242-113D13,8:112436918-112451264
(Clone quality: bE113D13 on chr=8; Num_of_Contigs=8; )
BMDP location ⇒ 8:112478627-112478848   CU928800,CH242-113D13,8:112475857-112493342
(Clone quality: bE113D13 on chr=8; Num_of_Contigs=8; )
BMDP location ⇒ 8:112498147-112498399   CU928800,CH242-113D13,8:112497339-112503472
(Clone quality: bE113D13 on chr=8; Num_of_Contigs=8; )
BMF location ⇒ 1:137667339-137667179   CU407289,CH242-512M11,1:137661906-137668484
(Clone quality: bE512M11 on chr=1; Num_of_Contigs=26; )
BMF location ⇒ 1:137712073-137712015   CU407289,CH242-512M11,1:137708411-137713924
(Clone quality: bE512M11 on chr=1; Num_of_Contigs=26; )
BMF location ⇒ 1:137712237-137712164   CU407289,CH242-512M11,1:137708411-137713924
(Clone quality: bE512M11 on chr=1; Num_of_Contigs=26; )
BMF location ⇒ 1:137713640-137713569   CU407289,CH242-512M11,1:137708411-137713924
(Clone quality: bE512M11 on chr=1; Num_of_Contigs=26; )
BMI1 ENSSSCG00000010596 14:119377001-119401958    
BMI1 ENSSSCG00000011081 10:50105056-50108289   CU855495,CH242-193A5,10:50076994-50112855
(Clone quality: bE193A5 on chr=10; Num_of_Contigs=4; )
BMI1 location ⇒ 10:50105489-50105191   CU855495,CH242-193A5,10:50076994-50112855
(Clone quality: bE193A5 on chr=10; Num_of_Contigs=4; )
BMI1 location ⇒ 10:50105663-50105580   CU855495,CH242-193A5,10:50076994-50112855
(Clone quality: bE193A5 on chr=10; Num_of_Contigs=4; )
BMI1 location ⇒ 10:50106126-50106026   CU855495,CH242-193A5,10:50076994-50112855
(Clone quality: bE193A5 on chr=10; Num_of_Contigs=4; )
BMI1 location ⇒ 10:50106766-50106657   CU855495,CH242-193A5,10:50076994-50112855
(Clone quality: bE193A5 on chr=10; Num_of_Contigs=4; )
BMP1 ENSSSCG00000009620 14:6400797-6442054    
BMP1 location ⇒ 14:6436434-6436485   CU468634,CH242-272G24,14:6407691-6485927
(Clone quality: bE272G24 on chr=14; Num_of_Contigs=7; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-28

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team