A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 10301 - 10400:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
SCAND1   ENSSSCG00000007312 17:41389921-41390460   CU633927,CH242-284L12,17:41359724-41396743
(Clone quality: bE284L12 on chr=17; Num_of_Contigs=12; )
SCAP1 ENSSSCG00000017527 12:21831008-21883082   FP016123,CH242-397L8,12:21776694-21937896
(Clone quality: bE397L8 on chr=12; Num_of_Contigs=6; )
SCAPER ENSSSCG00000001865 7:62021108-62305589    
SCARA5 ENSSSCG00000009672 14:11622486-11752749    
SCARB1 ENSSSCG00000009759 14:28301332-28491610    
SCARB2 ENSSSCG00000008980 8:61266681-61335669   FP016186,CH242-145A12,8:61242261-61350140
(Clone quality: bE145A12 on chr=8; Num_of_Contigs=1; )
SCARF2 ENSSSCG00000010109 14:51924446-51935107    
SCARNA11   ENSSSCG00000018288 5:60083851-60083990   CU914489,CH242-100M5,5:60080205-60088157
(Clone quality: bE100M5 on chr=5; Num_of_Contigs=13; )
SCARNA13   ENSSSCG00000018961 7:125614798-125615073 CT867964,CH242-267C2,7:125614014-125812235
(Clone quality: bE267C2 on chr=7; Num_of_Contigs=1; ) 		 
SCARNA14   ENSSSCG00000018666 1:171519508-171519643   CU062652,CH242-108M5,1:171491799-171560282
(Clone quality: bE108M5 on chr=1; Num_of_Contigs=3; )
SCARNA16   ENSSSCG00000020023 12:2880672-2880859 CU655873,CH242-326F7,12:2701845-2922206
(Clone quality: bE326F7 on chr=12; Num_of_Contigs=17; ) 		 
SCARNA17   ENSSSCG00000019703 1:102257381-102257526   CU618322,CH242-274A15,1:102245216-102266389
(Clone quality: bE274A15 on chr=1; Num_of_Contigs=10; )
SCARNA18   ENSSSCG00000018625 8:99325265-99325346   CU930042,CH242-378B3,8:99323412-99328223
(Clone quality: bE378B3 on chr=8; Num_of_Contigs=28; )
SCARNA18   ENSSSCG00000018659 8:99579705-99579786   FP016084,CH242-131A9,8:99563173-99587162
(Clone quality: bE131A9 on chr=8; Num_of_Contigs=3; )
SCARNA18   ENSSSCG00000018821 1:102257608-102257690   CU618322,CH242-274A15,1:102245216-102266389
(Clone quality: bE274A15 on chr=1; Num_of_Contigs=10; )
SCARNA20   ENSSSCG00000018254 3:9292885-9293014   CU655977,CH242-166N19,3:9275764-9314897
(Clone quality: bE166N19 on chr=3; Num_of_Contigs=8; )
SCARNA21   ENSSSCG00000019088 12:50144071-50144208   CU972380,CH242-124B22,12:50126282-50177524
(Clone quality: bE124B22 on chr=12; Num_of_Contigs=7; )
SCARNA21   ENSSSCG00000019112 12:50308702-50308839   FP102646,CH242-247L12,12:50306024-50319486
(Clone quality: bE247L12 on chr=12; Num_of_Contigs=8; )
SCARNA23   ENSSSCG00000019650 8:336404-336527   FP102229,CH242-106H10,8:324161-350156
(Clone quality: bE106H10 on chr=8; Num_of_Contigs=8; )
SCARNA24   ENSSSCG00000018575 X:19806209-19806338   CU570746,CH242-359E24,X:19769349-19818431
(Clone quality: bE359E24 on chr=X; Num_of_Contigs=7; )
SCARNA3   ENSSSCG00000018443 9:110897425-110897560   CU855662,CH242-3H1,9:110829420-110939504
(Clone quality: bE3H1 on chr=9; Num_of_Contigs=5; )
SCARNA4   ENSSSCG00000019282 4:98051782-98051912   CU151868,CH242-286M6,4:97945564-98074701
(Clone quality: bE286M6 on chr=4; Num_of_Contigs=4; )
SCARNA6   ENSSSCG00000019954 15:126248224-126248499   FP102656,CH242-26J3,15:126243395-126266604
(Clone quality: bE26J3 on chr=15; Num_of_Contigs=12; )
SCARNA8   ENSSSCG00000019776 1:212595294-212595424   CU633206,CH242-117K11,1:212551177-212716212
(Clone quality: bE117K11 on chr=1; Num_of_Contigs=2; )
SCD ENSSSCG00000010554 14:116330565-116346795   CT827831,CH242-224L12,14:116263324-116390345
(Clone quality: bE224L12 on chr=14; Num_of_Contigs=2; )
SCD5   ENSSSCG00000009245 8:116649525-116752791    
SCEL   ENSSSCG00000009474 11:48596276-48660061    
SCFD1   ENSSSCG00000001973 7:74865939-74935765    
SCFD2   ENSSSCG00000008836 8:34531882-34540031    
SCG3   ENSSSCG00000004630 1:125063510-125106124   CU019579,CH242-2K4,1:124966545-125142351
(Clone quality: bE2K4 on chr=1; Num_of_Contigs=2; )
SCG5   ENSSSCG00000004807 1:144186182-144203289    
SCGB1A1 ENSSSCG00000013060 2:7463684-7468478   FP102338,CH242-94E13,2:7461354-7473580
(Clone quality: bE94E13 on chr=2; Num_of_Contigs=10; )
SCGB1C1   ENSSSCG00000014554 2:139823526-139824983   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
SCGB3A1   ENSSSCG00000014008 2:67351168-67353012   CU928737,CH242-57D18,2:67309708-67370688
(Clone quality: bE57D18 on chr=2; Num_of_Contigs=12; )
SCGN   ENSSSCG00000001101 7:21572868-21616489    
SCIN   ENSSSCG00000015353 9:77079774-77108450    
SCLT1   ENSSSCG00000009070 8:82526329-82719351    
SCLY   ENSSSCG00000016334 15:130132812-130168731    
SCMH1   ENSSSCG00000003971 6:121556505-121584304   FP016067,CH242-126M8,6:121551012-121676967
(Clone quality: bE126M8 on chr=6; Num_of_Contigs=2; )
SCML1   ENSSSCG00000012152 X:13745957-13756300 CU207277,CH242-186H22,X:13637952-13829937
(Clone quality: bE186H22 on chr=X; Num_of_Contigs=1; ) 		 
SCML2   ENSSSCG00000012155 X:14338937-14442071    
SCML4   ENSSSCG00000004380 1:77418742-77434193    
SCN1B   ENSSSCG00000002878 6:29833496-29835363   FP102631,CH242-21N23,6:29833359-29835772
(Clone quality: bE21N23 on chr=6; Num_of_Contigs=2; )
SCN2A ENSSSCG00000015905 15:67147950-67223934    
SCN2B   ENSSSCG00000015088 9:44374321-44383848   FP102383,CH242-195F19,9:44362091-44419833
(Clone quality: bE195F19 on chr=9; Num_of_Contigs=1; )
SCN4A   ENSSSCG00000017282 12:12591089-12619924   CU466386,CH242-271O11,12:12583385-12667411
(Clone quality: bE271O11 on chr=12; Num_of_Contigs=5; )
SCN4B   ENSSSCG00000015087 9:44341689-44361448    
SCN5A   ENSSSCG00000011259 13:19268539-19355430    
SCN8A   ENSSSCG00000000228 5:15775900-15830824    
SCN9A ENSSSCG00000015913 15:68206582-68283686    
SCNM1   ENSSSCG00000006632 4:102034145-102036663 CU138569,CH242-265M12,4:101911025-102092543
(Clone quality: bE265M12 on chr=4; Num_of_Contigs=8; ) 		 
SCNN1B   ENSSSCG00000007835 3:20951250-20999609    
SCNN1D ENSSSCG00000003328 6:42772991-42868583    
SCNN1G   ENSSSCG00000007836 3:21061701-21092136   FP016036,CH242-110N18,3:21035624-21151631
(Clone quality: bE110N18 on chr=3; Num_of_Contigs=6; )
SCO1   ENSSSCG00000018008 12:52478379-52492918   CU856557,CH242-14N5,12:52466634-52504582
(Clone quality: bE14N5 on chr=12; Num_of_Contigs=6; )
SCO2   ENSSSCG00000000966 5:99709550-99710350   CU929756,CH242-288F8,5:99690941-99727774
(Clone quality: bE288F8 on chr=5; Num_of_Contigs=8; )
SCOC   ENSSSCG00000005653 1:283607936-283608280   CU862000,CH242-4D17,1:283577364-283612638
(Clone quality: bE4D17 on chr=1; Num_of_Contigs=2; )
SCP2   ENSSSCG00000003853 6:113080671-113203294    
SCPEP1   ENSSSCG00000017617 12:31074498-31102483    
SCRN1   ENSSSCG00000016684 18:41319073-41376514    
SCRN2   ENSSSCG00000017521 12:21600831-21605247   CU655852,CH242-166I5,12:21573723-21615705
(Clone quality: bE166I5 on chr=12; Num_of_Contigs=13; )
SCRN3   ENSSSCG00000015964 15:75237237-75244760   CU694548,CH242-149L4,15:75228809-75244820
(Clone quality: bE149L4 on chr=15; Num_of_Contigs=10; )
SCRT1   ENSSSCG00000005919 4:695854-696813   FP085492,CH242-176F2,4:677220-697185
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
SCTR   ENSSSCG00000015739 15:29214256-29228212    
SCUBE2   ENSSSCG00000014575 9:399189-442728   CU695192,CH242-65G4,9:386580-488562
(Clone quality: bE65G4 on chr=9; Num_of_Contigs=7; )
SCUBE3 ENSSSCG00000001536 7:35596571-35617151    
SCYL1   ENSSSCG00000012984 2:5053264-5066070    
SCYL2   ENSSSCG00000000877 5:79573719-79612876    
SCYL3   ENSSSCG00000006283 4:84225205-84266389    
SDAD1   ENSSSCG00000008974 8:60999255-61117935    
SDC1 ENSSSCG00000008601 3:109603804-109608153   CU856117,CH242-479B3,3:109586437-109610385
(Clone quality: bE479B3 on chr=3; Num_of_Contigs=16; )
SDC2 ENSSSCG00000006088 4:40347854-40472312    
SDC3 ENSSSCG00000003592 6:59860661-59869360    
SDC4 ENSSSCG00000007401 17:49658654-49678806   CU606851,CH242-219J22,17:49636607-49702762
(Clone quality: bE219J22 on chr=17; Num_of_Contigs=12; )
SDCBP ENSSSCG00000006237 4:77126612-77158781   CU582808,CH242-379F13,4:77090955-77172237
(Clone quality: bE379F13 on chr=4; Num_of_Contigs=8; )
SDCBP2   ENSSSCG00000007189 17:35664033-35681873   CU638675,CH242-204E6,17:35560423-35742963
(Clone quality: bE204E6 on chr=17; Num_of_Contigs=1; )
SDCCAG1   ENSSSCG00000005011 1:188039752-188086473   CU606975,CH242-251A8,1:188036812-188088768
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
SDCCAG8 ENSSSCG00000010871 10:15855296-15928953   CU571098,CH242-123F14,10:15850724-15932846
(Clone quality: bE123F14 on chr=10; Num_of_Contigs=5; )
SDF2   ENSSSCG00000017772 12:42673824-42683966    
SDF2L1   ENSSSCG00000010085 14:51323339-51325336   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
SDF4   ENSSSCG00000003332 6:42800941-42811060   FP102596,CH242-173K23,6:42793613-42821104
(Clone quality: bE173K23 on chr=6; Num_of_Contigs=10; )
SDHAF2   ENSSSCG00000013082 2:8382171-8394994   CU896534,CH242-169N17,2:8375072-8412883
(Clone quality: bE169N17 on chr=2; Num_of_Contigs=6; )
SDK1 ENSSSCG00000007574 3:2606911-2734825    
SDK2 ENSSSCG00000017244 12:5527833-5644640 CU928109,CH242-415P4,12:5525126-5703603
(Clone quality: bE415P4 on chr=12; Num_of_Contigs=6; ) 		 
SDPR   ENSSSCG00000016063 15:90975204-90986922   CU855682,CH242-93G4,15:90925045-90992881
(No clone quality info on )
SDR16C5   ENSSSCG00000006245 4:78483102-78495726   CU462960,CH242-392H23,4:78478849-78542797
(Clone quality: bE392H23 on chr=4; Num_of_Contigs=4; )
SDR16C6   ENSSSCG00000006244 4:78450443-78475768    
SDR39U1   ENSSSCG00000001983 7:81192117-81194765   CT997804,CH242-280B15,7:81187212-81281808
(Clone quality: bE280B15 on chr=7; Num_of_Contigs=5; )
SDR42E2   ENSSSCG00000007842 3:21765227-21791458    
SDR9C7   ENSSSCG00000000415 5:21288817-21293734   FP236389,CH242-191L18,5:21283790-21294860
(Clone quality: bE191L18 on chr=5; Num_of_Contigs=7; )
SDS ENSSSCG00000007732 3:14466464-14472957    
SDS ENSSSCG00000009870 14:38829379-38842345   CU468670,CH242-408G16,14:38815431-38894429
(Clone quality: bE408G16 on chr=14; Num_of_Contigs=3; )
SDS ENSSSCG00000009871 14:38859065-38869026   CU468670,CH242-408G16,14:38815431-38894429
(Clone quality: bE408G16 on chr=14; Num_of_Contigs=3; )
SDSL   ENSSSCG00000009870 14:38829379-38842345   CU468670,CH242-408G16,14:38815431-38894429
(Clone quality: bE408G16 on chr=14; Num_of_Contigs=3; )
SEC11C   ENSSSCG00000004912 1:168694607-168709165    
SEC13   ENSSSCG00000011572 13:55724725-55732990    
SEC14L1   ENSSSCG00000017169 12:2795045-2843691 CU655873,CH242-326F7,12:2701845-2922206
(Clone quality: bE326F7 on chr=12; Num_of_Contigs=17; ) 		 
SEC14L2   ENSSSCG00000010006 14:48179234-48199044   CT956025,CH242-69C12,14:48142322-48239134
(Clone quality: bE69C12 on chr=14; Num_of_Contigs=15; )
SEC14L3   ENSSSCG00000010008 14:48216507-48227116   CT956025,CH242-69C12,14:48142322-48239134
(Clone quality: bE69C12 on chr=14; Num_of_Contigs=15; )
SEC14L5   ENSSSCG00000007926 3:33427339-33468709    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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