A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 601 - 700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
APOBEC1 ENSSSCG00000001932 7:66465394-66475264    
APOBEC1 ENSSSCG00000010431 14:103519490-103590115    
APOBEC1 ENSSSCG00000011798 13:93990036-94009031   CU466376,CH242-17J7,13:93934222-94016715
(Clone quality: bE17J7 on chr=13; Num_of_Contigs=6; )
APOBEC3F ENSSSCG00000000091 5:5353997-5356390   CU686742,CH242-39B7,5:5353644-5363482
(Clone quality: bE39B7 on chr=5; Num_of_Contigs=13; )
APOBEC3H   ENSSSCG00000000091 5:5353997-5356390   CU686742,CH242-39B7,5:5353644-5363482
(Clone quality: bE39B7 on chr=5; Num_of_Contigs=13; )
APOBEC4   ENSSSCG00000015561 9:117189235-117190335   CU570827,CH242-238C10,9:117181532-117229304
(Clone quality: bE238C10 on chr=9; Num_of_Contigs=5; )
APOC2   ENSSSCG00000003086 6:35876828-35878012   CU459172,CH242-480J10,6:35842343-35886317
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
APOC3 ENSSSCG00000015069 9:43006353-43008697   CU582845,CH242-243D19,9:42983797-43024482
(Clone quality: bE243D19 on chr=9; Num_of_Contigs=5; )
APOC4   ENSSSCG00000003087 6:35879612-35879767   CU459172,CH242-480J10,6:35842343-35886317
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
APOD ENSSSCG00000011831 13:99660657-99679529   CU582896,CH242-39I7,13:99649204-99685305
(Clone quality: bE39I7 on chr=13; Num_of_Contigs=5; )
APOE ENSSSCG00000003088 6:35892837-35935962    
APOH ENSSSCG00000017267 12:10664952-10676930   CU466252,CH242-76O22,12:10653725-10706182
(Clone quality: bE76O22 on chr=12; Num_of_Contigs=13; )
APOL6   ENSSSCG00000000151 5:8374433-8382530    
APOM ENSSSCG00000001411 7:27729744-27732259 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
APOO   ENSSSCG00000012174 X:18779038-18855029    
APOOL   ENSSSCG00000012459 X:67259566-67332666   CU481471,CH242-254C9,X:67252645-67332667
(Clone quality: bE254C9 on chr=X; Num_of_Contigs=5; )
APP ENSSSCG00000003660 6:65403862-65420062 CR956622,PigE-219N9,6:65300804-65474973
(No clone quality info on bT219N9) 		 
APP ENSSSCG00000012022 13:135342672-135436951    
APP ENSSSCG00000012023 13:135449857-135508854    
APP ENSSSCG00000012651 X:104479369-104501139   CU856556,CH242-148P15,X:104475247-104501866
(Clone quality: bE148P15 on chr=X; Num_of_Contigs=17; )
APPBP2   ENSSSCG00000017678 12:35623636-35683948    
APPL2   ENSSSCG00000000841 5:74941794-74997509   CU928267,CH242-214E9,5:74894282-74998708
(Clone quality: bE214E9 on chr=5; Num_of_Contigs=3; )
APRT   ENSSSCG00000002650 6:495770-498149   FP102571,CH242-151H1,6:488095-498568
(Clone quality: bE151H1 on chr=6; Num_of_Contigs=15; )
APTX   ENSSSCG00000011001 10:31992795-32160184    
AQN-1 ENSSSCG00000002979 6:33144491-33166421    
AQN-3 ENSSSCG00000002977 6:33107915-33111962    
AQP10   ENSSSCG00000006551 4:99497924-99501015   CU856218,CH242-277E7,4:99496571-99509212
(Clone quality: bE277E7 on chr=4; Num_of_Contigs=4; )
AQP11   ENSSSCG00000014880 9:11943020-11953570    
AQP2   ENSSSCG00000000210 5:14543046-14612790    
AQP3   ENSSSCG00000010991 10:31577116-31582878   CU856468,CH242-364H6,10:31568942-31633500
(Clone quality: bE364H6 on chr=10; Num_of_Contigs=8; )
AQP4   ENSSSCG00000003720 6:76987944-76998242    
AQP6   ENSSSCG00000000212 5:14566595-14569114   CU633424,CH242-4O24,5:14564670-14570649
(Clone quality: bE4O24 on chr=5; Num_of_Contigs=4; )
AQP7   ENSSSCG00000010992 10:31630934-31646078    
AQP8   ENSSSCG00000007825 3:19662475-19673262   FP236419,CH242-58N20,3:19658528-19750192
(Clone quality: bE58N20 on chr=3; Num_of_Contigs=7; )
AQP9 ENSSSCG00000004597 1:117866259-117917833    
AQR   ENSSSCG00000004802 1:143630242-143864257    
AR ENSSSCG00000012371 X:53291744-53430261    
AR ENSSSCG00000016539 18:12977858-12996185   CU928709,CH242-57B10,18:12964676-13013079
(Clone quality: bE57B10 on chr=18; Num_of_Contigs=5; )
ARAF ENSSSCG00000012275 X:42046719-42058777   FP015952,CH242-69I19,X:42024061-42060417
(Clone quality: bE69I19 on chr=X; Num_of_Contigs=6; )
ARAP1   ENSSSCG00000014817 9:6871425-6910802    
ARAP2   ENSSSCG00000008768 8:23087629-23258955    
ARAP3 ENSSSCG00000014391 2:130214738-130236145   CU463118,CH242-312A3,2:130116991-130237824
(Clone quality: bE312A3 on chr=2; Num_of_Contigs=2; )
ARD1A   ENSSSCG00000012791 X:122769968-122774250   CU915581,CH242-139K22,X:122729751-122810838
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
ARF1   ENSSSCG00000013987 2:66452046-66469897 FP102564,CH242-144G7,2:66452040-66471471
(Clone quality: bE144G7 on chr=2; Num_of_Contigs=6; ) 		 
ARF3   ENSSSCG00000017315 12:15322002-15324599   CU928092,CH242-153I17,12:15321386-15347761
(Clone quality: bE153I17 on chr=12; Num_of_Contigs=9; )
ARF4 ENSSSCG00000011466 13:32993713-33013712   CU467952,CH242-20F23,13:32987254-33018707
(Clone quality: bE20F23 on chr=13; Num_of_Contigs=11; )
ARF5   ENSSSCG00000016593 18:18820546-18823765   CU861978,CH242-2M6,18:18763764-18883603
(Clone quality: bE2M6 on chr=18; Num_of_Contigs=4; )
Arf6 ENSSSCG00000005012 1:188129273-188130037   CU606975,CH242-251A8,1:188088869-188146416
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
ARF6 ENSSSCG00000005012 1:188129273-188130037   CU606975,CH242-251A8,1:188088869-188146416
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
Arf6 ENSSSCG00000010582 14:118457562-118459640   CU498828,CH242-221N13,14:118456049-118461184
(Clone quality: bE221N13 on chr=14; Num_of_Contigs=8; )
ARF6 ENSSSCG00000010582 14:118457562-118459640   CU498828,CH242-221N13,14:118456049-118461184
(Clone quality: bE221N13 on chr=14; Num_of_Contigs=8; )
ARFGAP2   ENSSSCG00000013245 2:13414544-13424685   CU469364,CH242-119B4,2:13316728-13478061
(Clone quality: bE119B4 on chr=2; Num_of_Contigs=2; )
ARFGAP3   ENSSSCG00000000037 5:2689009-2743987    
ARFGEF1   ENSSSCG00000006201 4:70010733-70106988    
ARFGEF2   ENSSSCG00000007460 17:53123866-53154021    
ARFIP1   ENSSSCG00000009010 8:65246756-65274807   FP067352,CH242-97G17,8:65226996-65275891
(Clone quality: bE97G17 on chr=8; Num_of_Contigs=7; )
ARFIP2   ENSSSCG00000014624 9:2561209-2564779   CU972372,CH242-47M8,9:2561067-2567081
(Clone quality: bE47M8 on chr=9; Num_of_Contigs=7; )
ARG1 ENSSSCG00000003600 6:60374014-60402308    
ARG1 ENSSSCG00000004195 1:33295233-33296874   CU633754,CH242-254O2,1:33260152-33299053
(Clone quality: bE254O2 on chr=1; Num_of_Contigs=9; )
ARG2 ENSSSCG00000002294 7:99749663-99791985    
ARGFX   ENSSSCG00000011886 13:104462568-104464201    
ARGLU1   ENSSSCG00000009536 11:74937071-74963254   CU019594,CH242-520K8,11:74866635-75013917
(Clone quality: bE520K8 on chr=11; Num_of_Contigs=2; )
ARHGAP1   ENSSSCG00000013256 2:14123252-14139957    
ARHGAP10   ENSSSCG00000009029 8:69645143-69870230    
ARHGAP11A   ENSSSCG00000004806 1:144116995-144137188    
ARHGAP12   ENSSSCG00000011026 10:40850132-40943156    
ARHGAP17   ENSSSCG00000007829 3:20078739-20136760    
ARHGAP19   ENSSSCG00000010516 14:113643376-113648734    
ARHGAP20   ENSSSCG00000015015 9:37456102-37493239    
ARHGAP21   ENSSSCG00000011074 10:48473667-48561191   CU694887,CH242-322E23,10:48445672-48606813
(Clone quality: bE322E23 on chr=10; Num_of_Contigs=1; )
ARHGAP22   ENSSSCG00000010381 14:92887455-93092734    
ARHGAP24   ENSSSCG00000009229 8:114105524-114148502    
ARHGAP25 ENSSSCG00000008344 3:67570891-67662589   FP236183,CH242-146A7,3:67562689-67713568
(Clone quality: bE146A7 on chr=3; Num_of_Contigs=2; )
ARHGAP26   ENSSSCG00000014399 2:131030807-131358836    
ARHGAP28   ENSSSCG00000003686 6:68741039-68899254    
ARHGAP29   ENSSSCG00000006889 4:127399455-127439411    
ARHGAP30   ENSSSCG00000006372 4:93012284-93020876    
ARHGAP4   ENSSSCG00000012790 X:122752679-122766762   CU915581,CH242-139K22,X:122729751-122810838
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
ARHGAP5 ENSSSCG00000001967 7:73422584-73433902   CU469344,CH242-418J4,7:73417862-73471928
(Clone quality: bE418J4 on chr=7; Num_of_Contigs=4; )
ARHGAP6   ENSSSCG00000012112 X:6754432-7036677    
ARHGAP9   ENSSSCG00000000438 5:21735933-21741811   CU896550,CH242-139E23,5:21710330-21749924
(Clone quality: bE139E23 on chr=5; Num_of_Contigs=9; )
ARHGDIB ENSSSCG00000000604 5:54887166-54907197    
ARHGEF1   ENSSSCG00000003040 6:34598042-34612084   FP015926,CH242-183C8,6:34597834-34614592
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
ARHGEF10L   ENSSSCG00000003486 6:52462643-52540557    
ARHGEF11   ENSSSCG00000006461 4:96799050-96852957    
ARHGEF12   ENSSSCG00000015129 9:46152246-46228243    
ARHGEF18   ENSSSCG00000013568 2:50860218-51020099    
ARHGEF19   ENSSSCG00000003472 6:51729378-51739595   FP103064,CH242-117J7,6:51686107-51745024
(Clone quality: bE117J7 on chr=6; Num_of_Contigs=6; )
ARHGEF2   ENSSSCG00000006502 4:97995684-98026848   CU151868,CH242-286M6,4:97945564-98074701
(Clone quality: bE286M6 on chr=4; Num_of_Contigs=4; )
ARHGEF4   ENSSSCG00000016390 15:133559290-133560282   CU929673,CH242-75H18,15:133555168-133568456
(Clone quality: bE75H18 on chr=15; Num_of_Contigs=2; )
ARHGEF5   ENSSSCG00000015466 9:106301474-106323349    
ARHGEF7 ENSSSCG00000009551 11:77844097-77936464    
ARHGEF9   ENSSSCG00000012362 X:50306207-50393778    
ARID1A   ENSSSCG00000003559 6:57698526-57794429    
ARID1B   ENSSSCG00000004064 1:10682232-10723953    
ARID2   ENSSSCG00000000805 5:72548767-72548910   CU694768,CH242-151M22,5:72545575-72628205
(Clone quality: bE151M22 on chr=5; Num_of_Contigs=3; )
ARID3A ENSSSCG00000013414 2:46101495-46418194    
ARID3B   ENSSSCG00000001905 7:64435293-64538483    
ARID3C   ENSSSCG00000010971 10:30617509-30624046   CU928717,CH242-142N10,10:30613639-30641888
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
ARID4A   ENSSSCG00000005073 1:196253123-196447019    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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