PPT Slide

Population-wide marker-QTL Linkage Equilibrium

Population frequencies: freq(M)=s freq(m)=t freq(Q)=.7 freq(q)=.3

Example

Q

Q

M

M

Q

q

M

M

q

q

M

M

q

Q

M

M

Q

Q

M

m

Q

q

M

m

q

q

M

m

q

Q

M

m

Q

Q

m

m

Q

q

m

m

q

q

m

m

q

Q

m

m

s2 (.49)

Frequency

s2 (.21)

s2 (.21)

s2 (.09)

2st (.49)

2st (.21)

2st (.21)

2st (.09)

t2 (.49)

t2 (.21)

t2 (.21)

t2 (.09)

Average

value

10

8

5

8

Average

.49*10+.21*8+.21*8+.09*5=8.71

.49*10+.21*8+.21*8+.09*5=8.71

.49*10+.21*8+.21*8+.09*5=8.71

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